I am trying to use shapeworks to compare the anatomy of three patient groups. I have mostly used the studio so far, and it gives a great visualization of the groupwise difference in the morphology. However, it is stuck to just comparing two groups at a time.
With the command line is it possible to run the underlining function with 3 or more groups. If not would it be easy enough to run it with the particles in another package and bring the results back to shapeworks to visualise ?